Journal article
Authors list: Oehm, S; Gilbert, D; Tauch, A; Stoye, J; Goesmann, A
Publication year: 2008
Pages: W433-W437
Journal: Nucleic Acids Research
Volume number: 36
Issue number: Supplement 2
ISSN: 0305-1048
eISSN: 1362-4962
DOI Link: https://doi.org/10.1093/nar/gkn284
Publisher: Oxford University Press
Abstract:
In order to understand the phenotype of any living system, it is essential to not only investigate its genes, but also the specific metabolic pathway variant of the organism of interest, ideally in comparison with other organisms. The Comparative Pathway Analyzer, CPA, calculates and displays the differences in metabolic reaction content between two sets of organisms. Because results are highly dependent on the distribution of organisms into these two sets and the appropriate definition of these sets often is not easy, we provide hierarchical clustering methods for the identification of significant groupings. CPA also visualizes the reaction content of several organisms simultaneously allowing easy comparison. Reaction annotation data and maps for visualizing the results are taken from the KEGG database. Additionally, users can upload their own annotation data. This website is free and open to all users and there is no login requirement.
Citation Styles
Harvard Citation style: Oehm, S., Gilbert, D., Tauch, A., Stoye, J. and Goesmann, A. (2008) Comparative Pathway Analyzer - a web server for comparative analysis, clustering and visualization of metabolic networks in multiple organisms, Nucleic Acids Research, 36(Supplement 2), pp. W433-W437. https://doi.org/10.1093/nar/gkn284
APA Citation style: Oehm, S., Gilbert, D., Tauch, A., Stoye, J., & Goesmann, A. (2008). Comparative Pathway Analyzer - a web server for comparative analysis, clustering and visualization of metabolic networks in multiple organisms. Nucleic Acids Research. 36(Supplement 2), W433-W437. https://doi.org/10.1093/nar/gkn284