Journal article

Comparative genome analysis of IncHI2 VIM-1 carbapenemase-encoding plasmids of Escherichia coli and Salmonella enterica isolated from a livestock farm in Germany


Authors listFalgenhauer, Linda; Ghosh, Hiren; Guerra, Beatriz; Yao, Yancheng; Fritzenwanker, Moritz; Fischer, Jennie; Helmuth, Reiner; Imirzalioglu, Can; Chakraborty, Trinad

Publication year2017

Pages114-117

JournalVeterinary Microbiology

Volume number200

ISSN0378-1135

eISSN1873-2542

DOI Linkhttps://doi.org/10.1016/j.vetmic.2015.09.001

PublisherElsevier


Abstract
Carbapenem-resistant Enterobacteriaceae are not any more isolated only from human settings, but also from livestock. We reported for the first time the presence of VIM-1 carbapenemases in a livestock farm in Germany. The VIM-1 resistance gene found in these farms was located on IncHI2 plasmids. In order to be able to analyse these plasmids in more detail, two different plasmids from a single farm (pRH-R27 from Salmonella enterica and pRH-R178 from Escherichia colt) were completely sequenced and analysed for the presence of antibiotic and heavy metal resistances. The plasmids showed to harbour bla(VIM-1), aacA4, aadA1, sul1, qacE Delta (encoded in an In110 class 1 integron), as well as bla(ACC-1), strA/strB, and catA1 genes together with resistance to heavy metals (ter-, mer-, sil-, ars-, rcn-, and pco). Comparison with other IncHI2 plasmid revealed that while pRH-R27 is a mosaic IncHI2 plasmid with both high homology to the plasmid pSTm-A54650 and R478, both isolated from humans, pRH-R178 is a deletion derivative of pRH-R27, presumably caused by several IS-mediated deletions indicating genetic evolution of plasmids in this environment. (C) 2015 Elsevier B.V. All rights reserved.



Citation Styles

Harvard Citation styleFalgenhauer, L., Ghosh, H., Guerra, B., Yao, Y., Fritzenwanker, M., Fischer, J., et al. (2017) Comparative genome analysis of IncHI2 VIM-1 carbapenemase-encoding plasmids of Escherichia coli and Salmonella enterica isolated from a livestock farm in Germany, Veterinary Microbiology, 200, pp. 114-117. https://doi.org/10.1016/j.vetmic.2015.09.001

APA Citation styleFalgenhauer, L., Ghosh, H., Guerra, B., Yao, Y., Fritzenwanker, M., Fischer, J., Helmuth, R., Imirzalioglu, C., & Chakraborty, T. (2017). Comparative genome analysis of IncHI2 VIM-1 carbapenemase-encoding plasmids of Escherichia coli and Salmonella enterica isolated from a livestock farm in Germany. Veterinary Microbiology. 200, 114-117. https://doi.org/10.1016/j.vetmic.2015.09.001



Keywords


ASSEMBLERINSERTION SEQUENCESLivestock farmPlasmid sequencingTN21VIM-1

Last updated on 2025-21-05 at 18:32