Professur für Systembiologie mit dem Schwerpunkt Genomik, Proteomik und Transkriptomik
Präsidium der Justus-Liebig-Universität Gießen » Fachbereiche » Fachbereich 08 - Biologie und Chemie » Dekanat Fachbereich 08 - Biologie und Chemie » Fachgebiet Biologie
Type of organisation: Professorship
Projects
- NFDI4Biodiversity 5/2 - Konsortium "NFDI4Biodervsity-Nationale Forschungsdateninfrastruktur für Biodiversitäts-, Ökologie- u. Umweltdaten
01/10/2025 - 31/12/2028
German Research Foundation (DFG) - de.NBl - Deutsches Netzwerk für Bioinformatikinfrastruktur
01/01/2025 - 31/12/2025
Hessian Ministry of Higher Education, Research, Science and the Arts (HMWK) - de.KCD TP - Deutsches Kompetenzzentrum Cloud-Technologien für Datenmanagement und -verarbeitung
01/12/2023 - 30/11/2026 - Tree-M - Mechanisms of resilience and environmental impact of the tree leaf microbiome
01/01/2023 - 31/12/2026
Hessian Ministry of Higher Education, Research, Science and the Arts (HMWK) - Deep-Legion, TP B - Erkennung von Virulenzfaktor-Proteindomänen in Legionellen mit Hilfe von Deep Autoencodern
01/03/2022 - 28/02/2025
Federal Ministry of Research, Technology and Space, former: Federal Ministry of Education and Research (BMFTR, BMBF)
Publications
- Comparative genomics of Salmonella enterica serovar Weltevreden plant and animal isolates (2011)
Brankatschk, K; Smits, TH; Goesmann, A; et al. - Complete genome sequence of the stone fruit pathogen Xanthomonas arboricola pv. pruni (2011)
Pothier, JF; Smits, TH; Blom, J; et al. - Construction and evaluation of a whole genome microarray of Chlamydomonas reinhardtii (2011)
Toepel, J; Albaum, SP; Arvidsson, S; et al. - Deep sequencing of naupliar-, cyprid- and adult-specific normalised Expressed Sequence Tag (EST) libraries of the acorn barnacle Balanus amphitrite (2011)
De Gregoris, TB; Rupp, O; Klages, S; et al. - Exact and complete short-read alignment to microbial genomes using Graphics Processing Unit programming (2011)
Blom, J; Jakobi, T; Doppmeier, D; et al. - Genome analysis of probiotic Symbioflor 2 Escherichia coli DSM17252 (2011)
Zschüttig, A; Eichhorn, C; Meltke, S; et al. - Genome of a European Fresh-Vegetable Food Safety Outbreak Strain of Salmonella enterica subsp enterica Serovar Weltevreden (2011)
Brankatschk, K; Blom, J; Goesmann, A; et al. - Genomics of the Proteorhodopsin-Containing Marine Flavobacterium Dokdonia sp Strain MED134 (2011)
Gonzalez, JM; Pinhassi, J; Fernandez-Gomez, B; et al.